Archive for Uncategorized

December 7 – 11, 2015

Monday, Dec. 7

MSCS and Biology Colloquium: Coping with cross-community contacts in cluster-randomized trials of infectious disease prevention
Nicole Bohme Carnegie ’05, Assistant Professor, Biostatistics, School Of Public Health at the University of Wisconsin – Milwaukee
3:30pm, RNS 310

Tuesday, Dec. 8

No Seminars

Wednesday, Dec. 9

Lunch with Dr. Russell Holmes, Univ. of MN
Holmes is the Director of Graduate Studies for the U. of MN Chemical Engineering and Materials Science (CEMS) program. The lunch will be hosted by Prof. Brian Borovsky, Physics.
12:00 noon in BC 222

Chemisty & Physics Joint Seminar: Directing Excited State Transport in Organic Semiconductors for Enhanced Photoconversion in Solar Cells
Professor Russell Holmes; Department of Chemical Engineering and Materials Science at the University of Minnesota 

2:00 pm, RNS 210
3:00 pm, after the talk, students are invited to chat with Dr. Holmes about the CEMS graduate program at UMN. RNS 210.

Thursday, Dec. 10

No Seminars

Friday, Dec. 11

No Seminars

Nov. 30 – Dec. 4, 2015

Monday, Nov. 30

Biology Seminar: Identification and Validation of Novel Therapeutic Targets of Osteosarcoma using Cutting Edge Technologies
Dr. Branden Moriarity ’07, Assistant Professor, Department of Pediatrics, Division of Hematology/Oncology, University of Minnesota
4:00 p.m., RNS 410

MSCS Colloquium has been canceled today.

Tuesday, Dec. 01

No seminar today

Wednesday, Dec. 02

No seminar today

Thursday, Dec. 03

No seminar today

Friday, Dec. 04

MSCS Research Seminar:
Solving Partial Differential Equations using the Unified Transform Method
Natalie Sheils, Visiting Assistant Professor at the University of Minnesota
Classical methods for solving linear partial differential equations with constant coefficients rely on separation of variables and specific integral transforms.  These methods are limited to specific equations with special boundary conditions.  In my talk I will introduce the Unified Transform Method, due to Fokas, which contains the classical solutions as special cases.  This method also allows for explicit solutions of problems which cannot be solved using classical techniques.  I will provide examples of problems on the half-line and on the finite interval.
3:30pm, RNS 204

November 16 – 20, 2015

Monday, Nov. 16

Chemistry Seminar – Second Candidate
RNS 390, 3:00 pm refreshment, 3:15 seminar will begin

Seminar: OPEN TO ALL MAJORS, Environmental Studies Seminar – “Protein Production for a Starving Planet: Low Resource Fish Farming in Haiti
Bill Mebane, Director of Sustainable Aquaculture Initiative at Marine Biological Laboratory, Woods Hole, MA
7:00 PM Viking Theater

ES1116 Mebane lecture St Olaf 2.0-1

Tuesday, Nov. 17

No Seminar

Wednesday, Nov. 18

No Seminars

Thursday, Nov. 19

No Seminars

Friday, Nov. 20

MSCS Research Seminar: Computational Characterization of Intra-Tumor Heterogeneity in Cancer
Layla Oesper, Assistant Professor of Computer Science at Carleton College
Cancer is a disease resulting from somatic mutations – those that occur during the individual’s lifetime – and cause the uncontrolled growth of a collection of cells into a tumor.  As we enter the era of personalized medicine, where a patient’s treatment may be tailored to their specific genomic architecture, accurate identification of the set of mutations within each patient’s genome is increasingly important. Despite numerous recent advances in DNA sequencing technologies, many challenges still exist for measuring and interpreting genomic mutations — especially for cancer genomes.  For example, tumors often exhibit intra-tumor heterogeneity where individual cells in a single tumor contain different complements of mutations.  In this talk, I will describe several algorithms that infer the composition of heterogeneous tumors, including one algorithm that reconstructs the evolutionary history of the tumor.
3:30pm RNS 204

Nov. 9 – 13, 2015

Monday, Nov. 9

Seminar: IMPACT Program
Katie Campbell, PhD, Director of IMPACT Program
4:00 PM RNS 410

1109 IMPACT 2016 Flyer St. Olaf

MSCS Colloquium: Computer Science Undergraduate Research Projects
Presented by summer research students in CS
What is CS undergraduate research, anyway?  Seven CS students will address that question by talking about their work in Spring and Summer 2015, describing a wide range of projects:  automatically grading homework code; exploring parallel programming languages; improving WebMapReduce software for big data computations; portable Beowulf clusters built from Raspberry Pis or USB drives; and HiPerCiC custom web apps for humanities professors and others.  Come and hear your classmates talk about their work!
3:15 cookies and conversation
3:30 PM Colloquium
RNS 310

Tuesday, Nov. 10

No Seminars

Wednesday, Nov. 11

No Seminars

Thursday, Nov. 12

Psychology Seminar: Industrial Organizational Psychologist
Dr. Anna Erickson
5:00 p.m., Buntrock 144
Dr. Anna Erickson, an Industrial/Organizational Psychologist, will be coming to share how I/O Psychology and psychology is used in the workplace!

Anna_Erickson

Friday, Nov. 13

No Seminars

November 2 – 6, 2015

Monday, Nov. 02

Seminar: Climate change, seasonal rainfall and plant physiology and fitness in neotropical forests
Visiting Professor Alyson Center, St. Olaf College
RNS 410 4PM

1102 climatechangeneoforests


MSCS Colloquium
: ‘Am I a Data Scientist’?
Alyssa Frazee, PhD in biostatistics from Johns Hopkins, currently with Stripe company in San Francisco
Data science is an exciting field! Most of the job hint at an appealing blend of statistics, math, programming, art, and business. “Data science” is also an ill-defined term: is it simply a tech-world rebranding of applied statistics? Is it data-oriented software engineering? Can you be a data scientist by training in some other field? Does the term even make sense? After all, Science itself wouldn’t exist without data! “The field exploded during my graduate studies in applied statistics, so in this talk, I’ll discuss what that looked like from my perspective. In particular, I will talk about how spending a summer immersed in programming and software engineering affected my mostly-academic perspective and contributed to my struggle with identifying as a “data scientist”.
RNS 310, 3:30pm / 3:15 enjoy a snack and conversation time

Statistics Grad School Night: Three panelists who are currently/recently in graduate programs in statistics or biostatistics will provide insights and answer questions such as: what is graduate school like? How does one choose a program? How does St. Olaf prepare you? What can one do with and advanced stats degree? And, is it true they really pay you to go to grad school?
RNS 206, 6:00pm pizza; Panel discussion 6:30pm – 7:30pm

Tuesday, Nov. 3

No Seminars

Wednesday, Nov. 4

No Seminars

Thursday, Nov. 05

Chemistry Seminar Necessity is the Mother of Invention: Natural Products and the Chemistry they Inspire
Dr. Sarah Reisman, Professor of Chemistry
Caltech
The chemical synthesis of natural products provides an exciting platform from which to conduct fundamental research in chemistry and biology. Our laboratory has ongoing research programs targeting the chemical syntheses of several natural products, including members of the epidithiodiketopiperazines, the ent-kauranoids, and the acutumine alkaloids. The densely packed arrays of heteroatoms and sterogenic centers that constitute these polycyclic targets challenge the limits of current synthetic methodology. This seminar will describe our latest progress in both our methodological and target-directed synthesis endeavors.
RNS 310, 3:00 p.m. refreshments, seminar will begin at 3:15 p.m.

Math Grad School Night: Are you considering graduate school in pure or applied math?
Are you wondering how to choose a grad program or what the application process involves? Did you know that you can get paid to be a grad student? Come to a panel discussion with three current grad students to hear about their experiences in grad school and ask your questions.
6:30pm – 7:30pm, RMS 6th floor lounge. Pizza will be provided!

Friday, Nov. 06

MSCS Seminar: Topological data analysis of biological aggregation modelsitle
Prof. Chad Topaz, Professor at Macalester College.
Biological aggregations are groups such as bird flocks, fish schools, and insect swarms in which organisms interact socially. These groups are striking examples of emergent self-organization, and simultaneously, they have served as inspiration for the development of algorithms in robotics, computer science, applied mathematics, and other fields. Aggregations give rise to massive amounts of data, for instance, the position and velocity of each group member at each moment in time during an observation. Interpreting this data to characterize the group’s dynamics can be a challenge. To this end, we apply techniques of topological data analysis to the influential aggregation models of Vicsek et al. (1995) and D’Orsogna et al. (2006). We construe position and velocity data from numerical simulations as point clouds of data varying over time. Using a method called persistent homology, we identify topological features that persist over multiple spatial scales, and see that the topological analysis detects dynamical events that are invisible to more commonly used methods. This tutorial-style talk assumes no prior knowledge of topology.
3:30pm, RNS 204

October 26 – 30, 2015

It’s Quiet Week! No seminars.

Friday, Oct. 30

TWISHalloweenPicHalloween Party! Faculty and students are welcome to gather in RNS for Halloween fun between  3-4pm. Costumes encouraged.  Faculty will wander around the building with treats for students. Hot Cider and popcorn provided in the fourth floor atrium. This takes place concurrently with some student organization parties to maximize the festivities.

October 19-23, 2015

Monday, Oct. 19

MSCS Colloquium: A Mathematical Playground
St. Olaf Mathematics Professors, Kos Diveris and Matthew Wright
Come and wander with us through the creative side of mathematics.    Discover how to cut a pizza evenly.  Explore the powers of tangent lines.  The St. Olaf problem-solving group will share some of our favorite problems, and maybe even some of their solutions.  You will broaden your mathematical horizons and find new uses for the tools in your mathematical toolbox.
RNS 301, 3:30 talk, 3:15 enjoy cookies and a time to visit

Tuesday, Oct. 20

No Seminars

Wednesday, Oct. 21

Physics Colloquium: A (very) abridged view of 25 years of discoveries with the Hubble Space Telescope
Michael Rutkowski; Research Associate, Institute for Astrophysics at the University of Minnesota.
2:00 pm, RNS 210

Chemistry Seminar:  “2015 Jean Dreyfus Boissevain Lecture”
Dr. Brian Kobilka, Stanford University School of Medicine, Nobel Laureate 2012

Kobilka

3:00 p.m. in Tomson Hall 280 with light reception to follow:
Structural insights into G protein coupled receptor signaling
G protein coupled receptors (GPCRs) conduct the majority of transmembrane responses to hormones and neurotransmitters, and mediate the senses of sight, smell and taste. The 2 adrenergic receptor (2AR), the M2 muscarinic receptor and the mu-opioid receptor are prototypical Family A GPCRs. We have obtained three-dimensional structures of these receptors in inactive and active conformations, as well as a structure of the 2AR in complex with the G protein Gs. Comparison of these structures provides insights into common mechanisms for propagation of conformational changes from the agonist binding pocket to the G protein coupling interface. We have also used fluorescence, EPR and NMR spectroscopy to study the dynamic properties of the β2AR. I will discuss what we these studies have taught us about signal transduction by GPCRs.

7:00 p.m.  in Tomson Hall 280 with dessert reception to follow in Tomson Hall Atrium:
G Protein Coupled Receptors: Challenges in Drug Discovery
G protein coupled receptors (GPCRs) mediate the majority of cellular responses to hormones and neurotransmitters, and are consequently the largest group of targets for drug discovery by the pharmaceutical industry. Approximately 40% of the drugs currently on the market target GPCRs; however, most efforts by the pharmaceutical industry to develop new drugs for GPCRs are not successful. I will discuss the challenges and opportunities for GPCR drug discovery.

Thursday, Oct. 22

MSCS To Be Or Not To Be event
Faculty members of MSCS
“To Be Or Not To Be” event will help you sort out how to live the rest of your life! Get information on what programs, courses, activities, and what on-campus and off-campus opportunities there are. Visit the information tables where MSCS faculty can answer all your questions about MSCS courses, research and internship opportunities, advice for what you should take while here, or careers you should consider upon leaving St. Olaf.  Of course, strategies for identifying and applying to graduate schools will also be available.
MOST IMPORTANT:  Top it all off, with ice cream sundaes!
6:30PM, TOH 280 & TOH East Lantern

Friday, Oct. 23

No Seminars

October 12 – 16, 2015

Monday, Oct. 12

No classes – Fall Break 

Tuesday, Oct. 13

No Classes – Fall Break 

Wednesday, Oct. 14

No Seminars

Thursday, Oct. 15

Chemistry Seminar: “Watching energy dance in plastic solar cells”
Dr. David Blank, University of Minnesota
3:00 p.m. refreshments, seminar will start at 3:15 p.m.

Friday, Oct. 16

MSCS Research SeminarThe combinatorics of q-analogues
Joel Lewis is a National Science Foundation postdoctoral fellow at the University of Minnesota.
Often, a combinatorial question involving permutations may be phrased naturally in terms of permutations matrices.  In this case, it is sometimes possible to phrase the same question in other contexts; in particular, for invertible matrices over a finite field having q elements.  In many situations, these two questions are related in the following very surprising way: the limit as q tends to 1 of the answer about matrices over finite fields is equal to the answer of the original question about permutations.  In this talk, I will discuss examples of this phenomenon of “q-analogues” that come from the part of combinatorics known as rook theory.  The only prerequisites for this talk are familiarity with linear algebra and the concept of a field.
3:30 p.m., RNS 204

October 5 – 9, 2015

Monday, Oct. 05

Psychology Seminar: Juta R. Millert Speaker Series in Psychology
Science and Pseudoscience in Everyday Life
Scott Lilienfeld, Ph.D., Emory University
4:00 p.m. – 5:00 p.m., RNS 150 (overflow in RNS 190)

Lilienfeld_updated(3)

Biology Seminar: Research in the Science Classroom

4-5PM RNS 410

1005Research in classroom flyer

MSCS Colloquium: Pop rocks and coke: urban myths of public health

Jessica Bestrashniy, Visiting Assistant Professor of MSCS
In this colloquium, we will discuss several controversial or questionable public health conclusions and demonstrate how DAGs could have been or should be used to address those question properly.
3:30pm, RNS 310

Tuesday, Oct. 06

No Seminars

Wednesday, Oct. 07

No Seminars

Thursday, Oct. 08

No Seminars

Friday, Oct. 09

No Seminars

September 28 – October 2, 2015

Monday, Sept 28

SeminarGenomics in model and nonmodel species
Dr. Suzanne McGaugh, Assistant Professor at the University of Minnesota
RNS 410, 4:00PM

Genomic divergence and diversity is far more complicated between diverging species and populations than we previously recognized. Here, I will present data from two genome-wide datasets illustrating the utility of genomics to answer questions in biology. First, I will show large-scale signatures of natural selection throughout the genome. Next, I will show the impact chromosomal inversions can have on shaping species diversity and divergence relative to genome-wide patterns. Finally, I will present new data using cavefish has a model system for population genomics. Cavefish populations, Astyanax mexicanus(Teleostei: Characiphysi), exhibit repeated, independent evolution for a variety of traits including eye degeneration, pigment loss, increased size and number of taste buds and mechanosensory organs, and shifts in many behavioural traits. Surface and cave forms are interfertile making this system amenable to genetic interrogation; however, lack of a reference genome has hampered efforts to identify genes responsible for changes in cave forms of A. mexicanus. Some preliminary population genomic analysis will be presented.

The McGaugh Lab is recruiting graduate students for Fall 2016. Please contact smcgaugh@umn.edu for more information.

MSCS Colloquium:  Partitions and Overpartitions: A Theorem of Legendre
Tina Garrett, Associate Professor of Mathematics at St. Olaf College
Abstract: We will introduce the basics if integer partitions and describe a relatively new class of partitions called overpartitions.  Overpartitions, first described by Corteel and Lovejoy, imply results related to the classical Legendre theorems in partitions theory.  We will describe some of the newest results in the study of overpartitions.3
3:30pm – 4:30pm, RNS 310

Tuesday, Sept 29

No seminar

Wednesday, Sept 30

Physics and Chemistry Joint Seminar: Two-Dimensional Electronic Spectroscopy Reveals Ultrafast Energy Transfer Events In Photosynthesis
Pete Dahlberg, Biophysical Sciences Graduate Program, The University of Chicago
2:00-3:00 pm, RNS 210

Thursday, Oct 01

No seminar

Friday, Oct 02

No seminar